Surgical EQ isn't relevant for pops and clicks, that's useful when removing a specific tone at a particular frequency, such as a ringing in the same caused by leakage or some sort of mains hum that you can hear when compressing a raw sample.
Referring back to the quick fading and overlapping I was talking about, this is simply a case of playing about with chopped up audio parts that are intended to be played as a single audio part, but using the fade handles you have at the front and end part of the sample to help gell them together better. Sometimes it's hard to do depending on the situation, but if I have a single click in there, it's often caused by a chop in a waveform that plays from one point and has to instantly switch to another point on the + and - spectrum. I use Cubase and it does allow for cutting at the 0 point, which is the centre, where no sound occurs, that way if you put two audio parts next to each other and they both attach together at the 0 point (flat line area of the wave middle), then there won't be any click. This isn't always succesfull though because the left and right waves often don't match perfectly, so you can still get clicks. What I do to counter this, is manually cut out the click and heal the gap by crossing over parts of the waveform, usually using a couple of tracks rather than using just the one audio track. Sometimes I'll even time stretch a tiny amount to fix the gap created by removing the click so that the position of the whole sound isn't being moved at all, but only that one small tiny section if being altered and the time stretching becomes unnoticed.
Another thing as well, depending on what you hear in the mix as a whole, sometimes you can get away with subtle clicks simply because they are masked by the rest of the track. This is usually a problem during quiet more solo section of the track where it becomes exposed. But as I described above, it's a case of cutting out the click entirely if it's inside the audio permanently and then smoothing the gap, or the click is caused by the natural overlapping caused by chopping up and stitching together where these waveforms do not both cross as the same position on the waveform causing a sudden change in volume, so quick that it becomes audible as a click.